Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015850551.1_cds_XP_016511205.1_23971
CDS Infomation

[gene=LOC107828423] [db_xref=GeneID:107828423] [protein=chaperone protein DnaJ-like] [protein_id=XP_016511205.1] [location=complement(join(10442..10487,10947..11052,12522..12613,12696..12856,14250..14379,15925..16100,18129..18324,19105..19223,20409..20501,20910..20978,21770..22108))] [gbkey=CDS]
Sequence

ATGAACTCTACGGCAATGGCCAGCACAGCTTCTCTATCTCTCCGCCCTTCTTTTCTCAGC
TTCACTACCTCCGACCGCTCCCATTGTCCCTCGCTTCCTCCTTCTTCCTCTTCTTGTTTC
TTCTCCGGTGGGACCCCTTTGTGGACCCACAAGAAGCTTATATCTGTTTCCTTTTCTTCT
TCTTCTTCTTCTTCCTCCCAGTACAATAAGAAGATATCGGCACGACGCTTTGGAAGATTG
GTGGTGGTTGCTGCCGCTGATTATTACTCCACTCTTGGGGTCCCAAAATCTGCTAGCAGT
AAAGATATTAAGGCTGCTTATCGAAGGTTAGCGCGCCAGTATCACCCGGATGTCAACAAG
GAACCTAATGCACCAGAAAAGTTTAAGGAGATTAAGGATGCTTATGAGGTACTATCAGAT
GACAAAAAAAGAGCATTATATGATCAATATGGTGAAGCCGGGGTGAAAAGTACTGTAGGG
GCCCAAGCAGGAGCTTACACGACAAATCCTTTTGATCTATTTGAAACATTCTTTGGACCT
TCTATGGGTGGTTTTGGAATGGACGGATCTGGATTTGGAACGCGTCGCCGCAGTACTGCT
ACCAAGGGTGAAGATCTACGTTACGACATGACATTAGGATTTTCAGCGGCTATCTTTGGA
GCAGAAAAAGAATTCGAGCTTTCACATCTTGAAACTTGTGAAGTTTGTGTGGGAACTGGA
GCAAAAGTAGGTTCCAAAATGAGGATATGCTCAACCTGTGGTGGCCGAGGTCAAGTTATG
AGGACTGAACAAACACCTTTTGGCATGTTTTCTCAGGTTTCTGTCTGCCCAAACTGTGGT
GGGGATGGTGAAATGATTTCTGAATCTTGTCGTAAATGCTCTGGCGAGGGGCGGATACGA
GTGAAGAAAGACATAAAAGTCAAGATACCTCCTGGAGTGAGCAAGGGCAGTATCCTCAGA
GTTGCTGGTGAGGGTGATGCAGGTCCTAGGGGGGCCCCGCCTGGAGATCTTTTTGTTTAT
CTTGACATTGAAGAGATACCTGAGATCCAAAGAGATGGCATAAATCTTATTTCAACAGTT
TCAGTTGGTTATCTAGATGCTATACTTGGGGCTGTTGTTAAGGTTAAAACAGTGGAAGGG
ATGACCGATCTCCAGATTCCTCCAGGCACTCAACCTGGTGATGTGCTTGTCTTGGCAAGG
AAAGGTGCACCGAAGCTGAATAAGCCATCAATACGTGGTGATCATTTGTTCACGATTAAA
GTTAGCATACCAAAACGCATCAGTGTGAAGGAGCGTGAATTGCTTGAAGAACTTGCATCC
CTAAATAAGACATCAAGCATTCGTACAAAACCTCGAGCAACAGTTCAGCCAACTGCTAAA
ACTACAGAAACTCCAGTAGATTCAGATTCAAGTACAGCAAAAACCGATGAGTCATCAGAA
GATCAAGATGATCCATTGAAGAAGTTAACAGATTTTGCTGGGTCTGTCGTGAATGGTGCA
CTAAAGTGGTTAAGAGACAACCTGTAA

Peptide Sequence

PEP ID

XP_016511205.1
PEP Infomation

PREDICTED: chaperone protein DnaJ-like [Nicotiana tabacum]
Sequence

MNSTAMASTASLSLRPSFLSFTTSDRSHCPSLPPSSSSCFFSGGTPLWTHKKLISVSFSS
SSSSSSQYNKKISARRFGRLVVVAAADYYSTLGVPKSASSKDIKAAYRRLARQYHPDVNK
EPNAPEKFKEIKDAYEVLSDDKKRALYDQYGEAGVKSTVGAQAGAYTTNPFDLFETFFGP
SMGGFGMDGSGFGTRRRSTATKGEDLRYDMTLGFSAAIFGAEKEFELSHLETCEVCVGTG
AKVGSKMRICSTCGGRGQVMRTEQTPFGMFSQVSVCPNCGGDGEMISESCRKCSGEGRIR
VKKDIKVKIPPGVSKGSILRVAGEGDAGPRGAPPGDLFVYLDIEEIPEIQRDGINLISTV
SVGYLDAILGAVVKVKTVEGMTDLQIPPGTQPGDVLVLARKGAPKLNKPSIRGDHLFTIK
VSIPKRISVKERELLEELASLNKTSSIRTKPRATVQPTAKTTETPVDSDSSTAKTDESSE
DQDDPLKKLTDFAGSVVNGALKWLRDNL

Transcript Sequence

Gene sequence data has not been registered.